p-value: | 1e-10 |
log p-value: | -2.464e+01 |
Information Content per bp: | 1.685 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 3.25% |
Number of Background Sequences with motif | 223.5 |
Percentage of Background Sequences with motif | 0.46% |
Average Position of motif in Targets | 41.2 +/- 26.9bp |
Average Position of motif in Background | 47.3 +/- 29.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC --GGATTAGC--- |
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GSC/MA0648.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC NNGGATTAGN--- |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ATGGATTAGGAGC TTGCCCGGATTAGG--- |
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POL013.1_MED-1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC -------CGGAGC |
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PITX3/MA0714.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC -GGGATTANN--- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC VRGGATTARN--- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC GNGGATTAGN--- |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGGATTAGGAGC -GGGATTAA---- |
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CUX1/MA0754.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATGGATTAGGAGC NTATCGATTA----- |
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CUX2/MA0755.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATGGATTAGGAGC TTATCGATTA----- |
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