Information for 2-CTTTGCTCTYYCT (Motif 5)

A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G T C G A C T G A C T G A C T A G C G T A C T A G T G A C C G T A G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.795
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif104.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.3 +/- 27.7bp
Average Position of motif in Background45.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGCTCTYYCT
CCTTTGATCTTT--
 A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCTCTYYCT
AACCCTTTGATCTTT--
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCTCTYYCT
TNCCTTTGATCTTN--
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGCTCTYYCT
AATCCCTTTGATCTATC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGCTCTYYCT
TNCCTTTGATGT----
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCTCTYYCT
TGGACTTTGNNCTCN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGCTCTYYCT
ATTTCCTTTGATCTATA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGCTCTYYCT
CCTTTGATGT----
 A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTTGCTCTYYCT
YCTTTGTTCC----
 A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCTCTYYCT
TGGACTTTGNNCTNTG-
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G A T A G T C A G C T G A C T A G C T A G T C A G C T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T