Information for 8-GAGGYCAAGGCAAAAA (Motif 14)

T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
Reverse Opposite:
G A C T A G C T G A C T A G C T A C G T T C A G A T G C A G T C C G A T A G C T A C T G T C G A A T G C A G T C C G A T A G T C
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.6 +/- 18.9bp
Average Position of motif in Background43.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
-AGGTCAAGGTCA---
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
-AGGTCAAGGTCA---
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
AAGTTCAAGGTCAGC-
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGYCAAGGCAAAAA
TRAGGTCA---------
 A C G T T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
---BTCAAGGTCA---
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
---NTCAAGGTCA---
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
-----CAAGGHCANV-
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGYCAAGGCAAAAA
CAGGCCNNGGCCNN--
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGYCAAGGCAAAAA
AGRGGTCA---------
 A C G T T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAGGYCAAGGCAAAAA
----TCAAGGTCATA-
 T A C G C G T A A C T G A T C G A G C T G T A C C T G A C G T A A C T G A T C G A G T C T C G A C T G A C T G A C T G A C G T A
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T