Information for 16-GCCTTCTATT (Motif 23)

A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C T G A C T G A G T C
p-value:1e-5
log p-value:-1.167e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.5 +/- 23.9bp
Average Position of motif in Background40.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCTTCTATT--------
---TTCTATTTTTAGNNN
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCCTTCTATT-----
-----CTATTTTTGG
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCTTCTATT
GCCATCTGTT
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTCTATT----
AGNGTTCTAATGANN
 A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCTTCTATT
-GCTTCC---
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCTTCTATT------
----KCTATTTTTRGH
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTTCTATT---
-CCTTTTATAGNC
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTCTATT-----
NNANTTTTATTGGNNN
 A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCTTCTATT--
--NTTTTATTGG
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTTCTATT---
---TTTTATTRGN
 A C T G A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A