Information for 3-CCTGTGTGTC (Motif 7)

A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A T G C G T C A A G T C C G T A A C T G C T A G
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif199.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets40.1 +/- 24.1bp
Average Position of motif in Background52.7 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTGTGTC
CCTTTGTTTT
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCTGTGTGTC--
-----NTGTCAN
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGTGTC---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGTGTGTC
CCTTTGTT--
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGTGTGTC
GCTGTG----
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGTGTC------
TNNNNGGTGTCATNTNT
 A C G T A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGTGTC---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTGTGTGTC--
----CCTGTCAA
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTGTGTGTC
-CTTTGT---
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCTGTGTGTC----
------TGTCANYT
 A G T C A G T C A C G T T C A G A C G T A T C G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T