Information for 3-ATCATGGCGG (Motif 8)

T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G
Reverse Opposite:
A T G C G T A C C T A G T G A C A T G C C G T A C A G T T A C G C G T A A G C T
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.696
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif914.0
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets55.5 +/- 25.7bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATCATGGCGG--
-TAATGGCGGNC
 T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC
 A C G T T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC
 A C G T T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCGG------
NNNNTTGGCGCCGANNN
 A C G T T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCGG------
NNNNTTGGCGCCGANNN
 A C G T T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCATGGCGG
GTCATN----
 T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATCATGGCGG
---TTGGCA-
 T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCATGGCGG-
--NTTGGCANN
 T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATCATGGCGG----
--BTKGGCGGGAAA
 T C G A G A C T A T G C G T C A A C G T A T C G A C T G G A T C A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A