Information for 7-AKGGCTGCGGTCS (Motif 12)

G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
Reverse Opposite:
A T C G A T C G C T G A A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C G T C A A C G T
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 18.5bp
Average Position of motif in Background73.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AKGGCTGCGGTCS
----TTGCGGTTT
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AKGGCTGCGGTCS
--NGCTN------
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AKGGCTGCGGTCS
---GCTGTG----
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AKGGCTGCGGTCS
NTGGGTGTGGCC-
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AKGGCTGCGGTCS
---GCTCCG----
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AKGGCTGCGGTCS
---GCTGTGGTTT
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AKGGCTGCGGTCS
---TTTGCGGTTT
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AKGGCTGCGGTCS--
CNNNGCTACTGTANNN
 A C G T G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKGGCTGCGGTCS
-TGGGTGTGGC--
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AKGGCTGCGGTCS
-TGGGTGTGGCN-
 G T C A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C T A G A T C G A G C T A T G C A T G C
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T