Information for 2-CAKGTGGTTTTGTTTT (Motif 4)

T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T
Reverse Opposite:
G T C A T C G A C T G A T C G A A T G C T C G A C T G A C T G A C T G A T G A C G T A C C G T A T G A C G T A C C A G T A T C G
p-value:1e-18
log p-value:-4.260e+01
Information Content per bp:1.642
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif181.7
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets52.3 +/- 24.6bp
Average Position of motif in Background45.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT-----
-----NNTTTTGTTTTGATNT
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT-
-----RSTTTCRSTTTC
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CAKGTGGTTTTGTTTT
------CCTTTGTTTT
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT--
---NTGGTTTCGGTTNNN
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAKGTGGTTTTGTTTT-
-----AGTTTCAKTTTC
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAKGTGGTTTTGTTTT-
ACATCTGGWWTYAATTAR
 A C G T T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT
NNTGTGGTTT------
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT--
----CAGTTTCGNTTCTN
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT------
-------CTTTGTTTACTTTTN
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAKGTGGTTTTGTTTT--
----NNGTANTGTTTTNC
 T A G C G T C A C A T G A C T G G C A T A C T G A C T G G A C T A G C T A G C T A G C T T A C G A G C T A G C T A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C