Information for 11-TGGCAGCTGCCAG (Motif 19)

C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
Reverse Opposite:
T G A C G A C T C A T G A T C G G T A C C G T A T A C G G T A C C G A T A C T G A T G C G T A C G T C A
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.683
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif276.8
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets50.2 +/- 23.5bp
Average Position of motif in Background49.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGCTGCCAG--
CTCAGCAGCTGCTACTG
 A C G T A C G T C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
-AGCAGCTGCT--
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
NNACAGCTGC---
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
-AGCAGCTGCTNN
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
--NCAGCTGCTG-
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCTGCCAG
-NVCAGCTGBBNN
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGCAGCTGCCAG
NNGCAGCTGTC--
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
-ANCAGCTG----
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCTGCCAG
-GCCAGCTGBTNB
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGCCAG
-CGCAGCTGCG--
 C A G T C A T G A T C G A G T C C G T A C A T G A T G C C G A T A C T G A T G C G T A C C T G A A C T G
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T