Motif 50

Information for 24-GAGCTCCGGGCTC (Motif 50)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.397e+01
Information Content per bp:	1.700
Number of Target Sequences with motif	25.0
Percentage of Target Sequences with motif	3.29%
Number of Background Sequences with motif	503.2
Percentage of Background Sequences with motif	1.05%
Average Position of motif in Targets	43.4 +/- 22.3bp
Average Position of motif in Background	51.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)	0.1
Multiplicity (# of sites on avg that occur together)	1.17
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:	1
Score:	0.69
Offset:	2
Orientation:	forward strand
Alignment:	GAGCTCCGGGCTC --GCTCCG-----

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	2
Score:	0.62
Offset:	2
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC- --GCTCCGCCCMCY

POL010.1_DCE_S_III/Jaspar

Match Rank:	3
Score:	0.57
Offset:	1
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC -NGCTN-------

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:	4
Score:	0.56
Offset:	1
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC -GGCTCYAKCAYC

Zfx/MA0146.2/Jaspar

Match Rank:	5
Score:	0.54
Offset:	-1
Orientation:	forward strand
Alignment:	-GAGCTCCGGGCTC GGGGCCGAGGCCTG

Sp1(Zf)/Promoter/Homer

Match Rank:	6
Score:	0.53
Offset:	1
Orientation:	forward strand
Alignment:	GAGCTCCGGGCTC -GGCCCCGCCCCC

TFAP2A/MA0003.3/Jaspar

Match Rank:	7
Score:	0.53
Offset:	1
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC -NGCCTGAGGCN-

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:	8
Score:	0.52
Offset:	1
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC -NGCCTNAGGCN-

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:	9
Score:	0.52
Offset:	1
Orientation:	forward strand
Alignment:	GAGCTCCGGGCTC -AGCCTCAGGCA-

POL011.1_XCPE1/Jaspar

Match Rank:	10
Score:	0.50
Offset:	2
Orientation:	reverse strand
Alignment:	GAGCTCCGGGCTC --GGTCCCGCCC-