Information for 20-ATCAKCAGCTTGC (Motif 42)

C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
Reverse Opposite:
A C T G G A T C C G T A C G T A A C T G A G T C A C G T A C T G G T C A A C G T A C T G C G T A A C G T
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.5 +/- 25.7bp
Average Position of motif in Background29.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATCAKCAGCTTGC
--CAGCTGNT---
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCAKCAGCTTGC
AGCAGCTGCT---
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATCAKCAGCTTGC
-----CAGCC---
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATCAKCAGCTTGC
GTCAGCANNTN--
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCAKCAGCTTGC-
--CAGCTGTTTCCT
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCAKCAGCTTGC
AGCAGCTGCTNN-
 C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATCAKCAGCTTGC
ADGGYAGYAGCATCT---
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCAKCAGCTTGC
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCAKCAGCTTGC
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCAKCAGCTTGC
NGTCAGCANTTT--
 A C G T C G T A G A C T A G T C C G T A A C G T A G T C C G T A A C T G A G T C G A C T A C G T C A T G A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T