Information for 17-YKSGTGGCYWTAKCCC (Motif 31)

A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A C T G A G T C A G T C C G T A G T A C A T C G T G C A C T A G
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 22.3bp
Average Position of motif in Background48.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:YKSGTGGCYWTAKCCC--
----TGACCTTTGCCCTA
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YKSGTGGCYWTAKCCC--
--CTTGGCANNNTGCCAA
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YKSGTGGCYWTAKCCC--
----TGACCTTTGCCCCA
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:YKSGTGGCYWTAKCCC
---GTGACCTT-----
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:YKSGTGGCYWTAKCCC---
----TGACCTTTGCCCTAN
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YKSGTGGCYWTAKCCC
----TGACCTTGACCT
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:YKSGTGGCYWTAKCCC
-GARTGGTCATCGCCC
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
A C G T T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--YKSGTGGCYWTAKCCC
NNCGCGTGNN--------
 A C G T A C G T A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:YKSGTGGCYWTAKCCC
--------ATAATCCC
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:YKSGTGGCYWTAKCCC
---GTGGAT-------
 A G T C A C G T A T G C A C T G A C G T A C T G A C T G A G T C A G T C C G A T G A C T C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T