Information for 13-GCCATAGCACAGGGTC (Motif 21)

A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
Reverse Opposite:
A C T G C T G A A T G C A G T C A G T C C G A T A C T G C A G T A T C G A G T C A G C T C G T A G A C T C T A G C A T G A T G C
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 19.3bp
Average Position of motif in Background42.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCCATAGCACAGGGTC
-------CACAGN---
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC
--CCAGGAACAG----
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC-
-----AGGTCAAGGTCA
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC-----
-----AGAGCGGGGTCAAGTA
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC-
-----AGGTCAAGGTCA
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC-----
-----CGCGCCGGGTCACGTA
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCATAGCACAGGGTC
----AAGCACATGG--
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCATAGCACAGGGTC
TGACANARRCCAGRC--
 A C G T A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCCATAGCACAGGGTC
----GACCACGTGGT-
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
A C G T A C G T A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCCATAGCACAGGGTC
--CACAGCGGGGGGTC
 A T C G G A T C A G T C C T G A C G A T C T G A A C T G A T G C G T C A A G T C G C T A C T A G A C T G A T C G G A C T G T A C
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C