Information for 1-ATTAGCCGCCAGGCWG (Motif 2)

C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
Reverse Opposite:
A G T C C G T A A C T G G T A C T A G C C A G T A C T G C T A G A G T C C A T G A C T G A T G C C G A T G T C A G T C A A C G T
p-value:1e-16
log p-value:-3.776e+01
Information Content per bp:1.731
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 18.2bp
Average Position of motif in Background63.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATTAGCCGCCAGGCWG
GGTAATTAGC----------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATTAGCCGCCAGGCWG
AGGGGGATTAGCTGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATTAGCCGCCAGGCWG
GGTAATTAGC----------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:ATTAGCCGCCAGGCWG---
---------CCTGCTGAGH
 C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

HOXA2/MA0900.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATTAGCCGCCAGGCWG
CCTAATTACC----------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATTAGCCGCCAGGCWG
---TGCCCCCGGGCA-
 C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ATTAGCCGCCAGGCWG
ACTAATTAGC----------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ATTAGCCGCCAGGCWG---
----GGCCYCCTGCTGDGH
 C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

EN2/MA0642.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ATTAGCCGCCAGGCWG
CCCAATTAGC----------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATTAGCCGCCAGGCWG
--NTGCCCTTGGGCGN
 C G T A A C G T A C G T C G T A A T C G A G T C G T A C T C A G G A T C A G T C G T C A A C T G A C T G A G T C G C A T A C T G
A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G