Information for 13-ACTGAGGTCA (Motif 36)

C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A C G T A G T C G T C A A C T G C G A T
p-value:1e-4
log p-value:-1.094e+01
Information Content per bp:1.951
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif31.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.8 +/- 31.1bp
Average Position of motif in Background57.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ACTGAGGTCA
--TRAGGTCA
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:ACTGAGGTCA
--AGRGGTCA
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ACTGAGGTCA----
-CAAAGGTCAAGGG
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.76
Offset:4
Orientation:forward strand
Alignment:ACTGAGGTCA
----AGGTCA
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ACTGAGGTCA-
-CAAAGGTCAG
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACTGAGGTCA-
NRRTGACGTCAT
 A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ACTGAGGTCA
--TGACGTCA
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACTGAGGTCA---
-RTGACGTCAYCN
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ACTGAGGTCA-
---AAGGTCAC
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACTGAGGTCA
ATCAAGGTCA
 C G T A A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A