Information for 20-TCACMYCAMTCAS (Motif 32)

C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
Reverse Opposite:
A T C G A G C T A C T G C G T A A C T G A C G T A C T G C T G A A C G T A C T G A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.869
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 18.7bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCACMYCAMTCAS
ATCACCCCAC----
 A C G T C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCACMYCAMTCAS
ATCACCCCAT----
 A C G T C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCACMYCAMTCAS
ATCACCCCAT----
 A C G T C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCACMYCAMTCAS
CNGTCACGCCAC----
 A C G T A C G T A C G T C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCACMYCAMTCAS-
--CCATCAATCAAA
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCACMYCAMTCAS
-----CCAATCAA
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCACMYCAMTCAS
--TCATCAATCA-
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCACMYCAMTCAS---
GAAGATCAATCACTTA
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCACMYCAMTCAS
-GYCATCMATCAT
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCACMYCAMTCAS
-GCCATAAATCA-
 C G A T A G T C C G T A A G T C G T C A A G C T A G T C C G T A G T A C A C G T A G T C C T G A A T G C
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T