p-value: | 1e-7 |
log p-value: | -1.677e+01 |
Information Content per bp: | 1.929 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.51% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 68.3 +/- 12.6bp |
Average Position of motif in Background | 50.5 +/- 0.8bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATTGAGCTGCAT ---TGACCTTGAT |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATTGAGCTGCAT TGACCTTGACCT---- |
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ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATTGAGCTGCAT GRTGMTRGAGCC---- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATTGAGCTGCAT--- --TTGACCTANTTATN |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATTGAGCTGCAT-- CTTTGTTATGCAAAT |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATTGAGCTGCAT TGACCTTGACCT---- |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CATTGAGCTGCAT-- --TTCATTTGCATAT |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CATTGAGCTGCAT AGGTCANTGACCTN--- |
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OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATTGAGCTGCAT-- YATGCATATRCATRT |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CATTGAGCTGCAT -----NGCTN--- |
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