Information for 6-CGGGAGCATA (Motif 20)

G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
Reverse Opposite:
A G C T T G C A A C G T A C T G A G T C A G C T A G T C A G T C G T A C A C T G
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif48.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.9 +/- 29.8bp
Average Position of motif in Background52.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCATA
-CGGAGC---
 G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCATA-
-GGGAGGACNG
 G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCATA
GGGCGGGACC---
 A C G T A C G T A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGGGAGCATA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGGAGCATA
CCAGGAACAG-
 A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCATA
GGGCGGGAAGG--
 A C G T A C G T A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCATA
GGGCGGGAAGG--
 A C G T A C G T A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGGAGCATA----
----ANCATATGGT
 G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAGCATA-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGGAGCATA-
-TGGAACAGMA
 G T A C C A T G A C T G A C T G C T G A T C A G A G T C C G T A A C G T C T G A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A