p-value: | 1e-9 |
log p-value: | -2.178e+01 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.8 +/- 23.6bp |
Average Position of motif in Background | 59.2 +/- 13.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CYMACCAAGGCRGSAG CACAGCAGGGGG---- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CYMACCAAGGCRGSAG CCACACAGCAGGAGA---- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CYMACCAAGGCRGSAG CCACACAGCAGGAGA---- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CYMACCAAGGCRGSAG- CAAATCCAGACATCACA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CYMACCAAGGCRGSAG DCHCAGCAGGRGGCC-- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CYMACCAAGGCRGSAG GAGCACAGCAGGACA---- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CYMACCAAGGCRGSAG DCTCAGCAGG------- |
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E2F6/MA0471.1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CYMACCAAGGCRGSAG-- -------GGGCGGGAAGG |
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E2F4/MA0470.1/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CYMACCAAGGCRGSAG-- -------GGGCGGGAAGG |
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Sox2/MA0143.3/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CYMACCAAGGCRGSAG --AACAAAGG------ |
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