Information for 6-GGCAGGTCACGTG (Motif 12)

A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C T A G C A G T A T C G C G T A A G T C G T A C A G C T A T C G A T G C G T A C
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.768
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif77.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.5 +/- 29.2bp
Average Position of motif in Background46.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:GGCAGGTCACGTG--
----GGTCACGTGGC
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGCAGGTCACGTG-
--CCGGTCACGTGA
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T
A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GGCAGGTCACGTG--
----GGTCACATGAC
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GGCAGGTCACGTG-
----GGTCACGTGA
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GGCAGGTCACGTG-
----GGTCACGTGC
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GGCAGGTCACGTG--
-----GTCACGTGGT
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:GGCAGGTCACGTG--
-----GTCACGTGAT
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:GGCAGGTCACGTG--
-----GTCACGTGNT
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.70
Offset:5
Orientation:forward strand
Alignment:GGCAGGTCACGTG
-----GHCACGTG
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GGCAGGTCACGTG--
-----GTCACATGAY
 A C T G A T C G T A G C T C G A A C T G A C T G G C A T A T G C G C T A A G T C T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C