Information for 13-ACTGCCCTAA (Motif 30)

C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A A T C G A T C G C T A G T G A C C T G A A T C G G A C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.773
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif105.1
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets63.3 +/- 27.4bp
Average Position of motif in Background50.9 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACTGCCCTAA
-CTGCCCGCA
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACTGCCCTAA---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTAA--
--TGACCTARTT
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTAA
--TGACCTYA
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTGCCCTAA--
AGGTCTCTAACC
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGCCCTAA----
GGTTCCNNAATTTG
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTGCCCTAA-----
-TTGACCTANTTATN
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACTGCCCTAA-----
-----GCTAATTGCT
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACTGCCCTAA---
-ATGCCCTGAGGC
 C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCCCTAA
KGCCCTTCCCCA-
 A C G T A C G T A C G T C T G A T A G C A G C T A C T G A G T C A T G C A T G C A G C T C G T A C G T A
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T