Information for 9-GGAGCGTCTCCGGCCC (Motif 23)

A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
Reverse Opposite:
C T A G A T C G A T C G A G T C A T G C C T A G A C T G C T G A C T A G T C G A A T G C C T A G A G T C C G A T A T G C A T G C
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.730
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.7 +/- 27.5bp
Average Position of motif in Background33.0 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTCTCCGGCCC
CGGAGC-----------
 A C G T A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGCGTCTCCGGCCC
-CAGCC----------
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGAGCGTCTCCGGCCC
-----NCTTCCCGCCC
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGAGCGTCTCCGGCCC
-----NYTTCCCGCC-
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGAGCGTCTCCGGCCC
-----NNTTCCCGCCC
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGAGCGTCTCCGGCCC---
GGYAGCAYDTGCTDCCCNNN
 A C G T A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTCTCCGGCCC
NGAAGC-----------
 A C G T A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GGAGCGTCTCCGGCCC--
------GCTCCGCCCMCY
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GGAGCGTCTCCGGCCC
----VDTTTCCCGCCA
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GGAGCGTCTCCGGCCC-
-----GGCCCCGCCCCC
 A T C G T A C G C G T A A C T G G A T C A T C G A C G T A G T C A G C T A G T C A G T C A T C G C T A G A T G C A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C