Information for 1-CWCTCTGCTG (Motif 5)

A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G
Reverse Opposite:
T G A C T G C A T C A G T G A C C T G A A T C G C G T A C A T G G C T A T A C G
p-value:1e-12
log p-value:-2.811e+01
Information Content per bp:1.666
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.46%
Number of Background Sequences with motif1738.9
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets50.3 +/- 25.2bp
Average Position of motif in Background49.5 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CWCTCTGCTG--
CCCCCTGCTGTG
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CWCTCTGCTG-
-NAHCAGCTGD
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CWCTCTGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CWCTCTGCTG--
-AATTTGCTGAC
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CWCTCTGCTG--
GACCCCCCGCTGTG
 A C G T A C G T A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CWCTCTGCTG--
--ATCAGCTGTT
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CWCTCTGCTG---
GACCCCCCGCTGCGC
 A C G T A C G T A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CWCTCTGCTG
--ANCAGCTG
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWCTCTGCTG
-----NGCTN
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CWCTCTGCTG--
----CAGCTGTT
 A T G C C G A T G T A C G C A T A T G C A G C T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T