Information for 18-CGGGGGACGTTCC (Motif 35)

A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
Reverse Opposite:
A T C G A C T G C T G A C G T A A T G C C T A G A C G T A G T C A T G C A G T C A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.206e+01
Information Content per bp:1.848
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.9 +/- 26.9bp
Average Position of motif in Background46.4 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGGGGGACGTTCC
---GGGGATTTCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGGGGACGTTCC
-NGGGGATTTCCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGGGGACGTTCC
---GGGAATTTCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGGGGACGTTCC
---GGGGATTTCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGGGGACGTTCC
-TGGGGA------
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGGGGACGTTCC
---GGGAATTTCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGACGTTCC
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGACGTTCC
TTCGGTGGTCGC---
 A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGGGGACGTTCC
-GGGGGAATCCCC
 A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGACGTTCC
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G G T C A A G T C A T C G A C G T A G C T A G T C A T G C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T