Information for 9-TCCCGTTCAG (Motif 28)

A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A C T G A T G A C A C T G C T A G A T C G C T G A
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.866
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif37.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.5 +/- 30.1bp
Average Position of motif in Background46.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCCCGTTCAG
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCCCGTTCAG
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCCCGTTCAG--
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGTTCAG
GGTCCCGCCC--
 A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGTTCAG
NCTTCCCGCCC--
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCCCGTTCAG----
------TCAGTCTT
 A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGTTCAG
NNTTCCCGCCC--
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGTTCAG
TTTCCCGCCMAV
 A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCCGTTCAG-
-ANCGTTTANN
 A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGTTCAG
NYTTCCCGCC---
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C A C T G G A C T A C G T A G T C C G T A A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T