Information for 8-GAACAGCAGA (Motif 28)

A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.206e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 32.7bp
Average Position of motif in Background46.5 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GAACAGCAGA-
AGAGRRACAGCWGAC
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GAACAGCAGA
TGGAACAGMA--
 A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAACAGCAGA-
-AACAGCTGAT
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C G T
A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAACAGCAGA
-AACAGCTG-
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAACAGCAGA
BAACAGCTGT
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACAGCAGA--
-AACAGCTGCAG
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAACAGCAGA
CCAGGAACAG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACAGCAGA
-ANCAGCTG-
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAACAGCAGA
NAACAGCTGG
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAACAGCAGA-
-AACAGCTGTT
 A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C G T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T