Information for 3-GTGGCAGCAAGGG (Motif 11)

A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C A C G T A C G T A C T G A G T C A C G T A C T G A G T C A T G C C G T A A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.5 +/- 16.2bp
Average Position of motif in Background68.1 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCAGCAAGGG
TGAGTCAGCA----
 A C G T A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGGCAGCAAGGG-
--CACAGCAGGGGG
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGCAGCAAGGG-
CCACACAGCAGGAGA
 A C G T A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGCAGCAAGGG---
-DCHCAGCAGGRGGCC
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGGCAGCAAGGG-
CCACACAGCAGGAGA
 A C G T A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGGCAGCAAGGG
---ACAGGAAGTG
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGGCAGCAAGGG
---ACAGGAAGTG
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGGCAGCAAGGG
-DCTCAGCAGG--
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCAGCAAGGG
AGGTGNCAGACAG--
 A C G T A C G T A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGGCAGCAAGGG--
-TGGCACCATGCCAA
 A C T G A C G T A T C G A C T G A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A