Information for 6-GGAGAGGAGCAGCTGG (Motif 9)

A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G
Reverse Opposite:
A G T C A G T C C T G A A C T G A T G C C G A T A C T G A G T C C G A T A T G C A G T C A C G T A G T C A G C T A G T C A G T C
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.866
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 23.5bp
Average Position of motif in Background39.8 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG----
---NNNNAGCAGCTGCTGAN
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG
------CAGCAGCTGN
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG-
-----NNAGCAGCTGCT
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG-
----NGNGACAGCTGCN
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGAGAGGAGCAGCTGG
------NAACAGCTGG
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGAGAGGAGCAGCTGG
-------ANCAGCTG-
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG-
-------AGCAGCTGCT
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GGAGAGGAGCAGCTGG---
-------NVCAGCTGBBNN
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGAGAGGAGCAGCTGG-
-----VNAVCAGCTGGC
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GGAGAGGAGCAGCTGG--
-------GACAGCTGCAG
 A C T G A C T G T C G A A C T G T C G A A C T G A T C G C G T A A C T G A G T C C G T A A T C G A G T C A G C T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G