Information for 4-AGGCCCGRCHCCTCCT (Motif 5)

C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
Reverse Opposite:
C G T A A C T G A T C G C T G A A C T G C T A G C A T G A C T G A G T C A G T C A C T G A C T G A C T G A T G C A G T C A G C T
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.753
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif181.6
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets52.9 +/- 26.0bp
Average Position of motif in Background49.2 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT
-GCCCCGCCCCCTCCC
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT
GGCCCCGCCCCC----
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT-
GGTCCCGCCCCCTTCTC
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT
-CCCCCGCCCCCGCC-
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT-
-----SNGCACCTGCHS
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGCCCGRCHCCTCCT
TAAGCCACGCCCCCTTT-
 A C G T A C G T C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCGRCHCCTCCT
NAGCCCCGCCCCCN---
 A C G T C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCCCGRCHCCTCCT
-GCCCCGCCCCC----
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCGRCHCCTCCT
CAGGCCNNGGCCNN---
 A C G T C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCCGRCHCCTCCT
-GCTCCGCCCMCY---
 C T G A C T A G A T C G G T A C A G T C T G A C A C T G T C A G G T A C G T A C A G T C A G T C A G C T A T G C A G T C C G A T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T