Information for 14-AGCCACGGAG (Motif 25)

C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C T G A G T C A C G T
p-value:1e0
log p-value:-1.337e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.5 +/- 31.7bp
Average Position of motif in Background53.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGCCACGGAG-
-----CGGAGC
 C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACGGAG
AAACCACAGAN
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGCCACGGAG
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCCACGGAG
ATCCAC----
 C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCACGGAG
AGTCACGC--
 C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGGAG
CAGCC------
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCCACGGAG
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGGAG
AAACCACANN-
 A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCCACGGAG
---CACGCA-
 C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCACGGAG
TBGCACGCAA
 C G T A A C T G A G T C A G T C C G T A A G T C A C T G A C T G C G T A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A