Information for 3-CCTCACAGKG (Motif 11)

A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
Reverse Opposite:
G T A C G T C A A T G C A G C T A C T G G C A T A T C G C T G A A T C G T C A G
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.712
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif9.47%
Number of Background Sequences with motif2534.3
Percentage of Background Sequences with motif5.20%
Average Position of motif in Targets46.9 +/- 26.6bp
Average Position of motif in Background49.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCTCACAGKG
---CACAGN-
A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTCACAGKG
CRCCCACGCA---
A C G T A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCTCACAGKG
TATCGACCCCCCACAG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

ZNF740/MA0753.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCACAGKG
CCCCCCCCAC--
A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCACAGKG
NWAACCACADNN
A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTCACAGKG
TCCCCA-----
A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCACAGKG
AGCCACTCAAG-
A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTCACAGKG-----
CCACACAGCAGGAGA
A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCACAGKG
AAACCACAGAN
A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTCACAGKG
GGACCACCCACG-
A C G T A C G T A C G T A G T C A T G C G A C T A T G C C G T A A G T C T C G A A T C G C A G T C A T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T