Information for 3-YYTGTGGTTDGYD (Motif 3)

A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
Reverse Opposite:
G C A T C T G A A G T C G C A T T C G A C T G A A G T C A G T C C G T A G T A C C G T A C T A G C T G A
p-value:1e-65
log p-value:-1.505e+02
Information Content per bp:1.625
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif23.83%
Number of Background Sequences with motif2462.8
Percentage of Background Sequences with motif5.17%
Average Position of motif in Targets51.3 +/- 26.3bp
Average Position of motif in Background50.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-YYTGTGGTTDGYD
NNHTGTGGTTWN--
 A C G T A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-YYTGTGGTTDGYD
GTCTGTGGTTT---
 A C G T A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
-CTGTGGTTTN--
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:YYTGTGGTTDGYD
GCTGTGGTTT---
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
NNTGTGGTTT---
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
TTTGCGGTTT---
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
-TTGCGGTTT---
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
---GTGGAT----
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-YYTGTGGTTDGYD
NTCGGTGGTCGC--
 A C G T A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YYTGTGGTTDGYD
--TGTGGATTNNN
 A G C T G A T C A C G T A C T G C G A T A C T G A C T G A G C T A G C T C G T A T C A G G A C T C G T A
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A