Information for 19-GSCTYCSCMYACAAGM (Motif 11)

A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
Reverse Opposite:
A C T G A G T C A G C T A C G T A C T G A C G T C T A G A C T G A T C G A T G C C A T G C T G A C G T A A C T G A T G C A G T C
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 28.1bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM
-GCTCCGCCCMCY---
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM---
----TCCCAGMCRAGCCCC
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM-
--ATTTGCATACAATGG
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GSCTYCSCMYACAAGM--
--CGAAGCACACAAAATA
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GSCTYCSCMYACAAGM
-GCTTCC---------
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM----
GCCTCCTCCMTCWGACTGKS
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM
--TTCCCCCTAC----
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GSCTYCSCMYACAAGM
-GCTCCG---------
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GSCTYCSCMYACAAGM
NNNVCTGWGYAAACASN-
 A C G T A C G T A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GSCTYCSCMYACAAGM
---YCCGCCCACGCN-
 A C T G A T C G A G T C A C G T A G C T G A T C A T C G A T G C G T A C A G T C C G T A A G T C C G T A C T G A A C T G G T A C
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T