Information for 5-AATTTAGAATYTTTGA (Motif 8)

C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
Reverse Opposite:
G C A T T G A C T G C A C G T A G T C A T C A G C G T A A C G T C G A T G A T C C A G T G C T A C G T A C G T A C G A T A G C T
p-value:1e-13
log p-value:-3.152e+01
Information Content per bp:1.669
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.7 +/- 27.0bp
Average Position of motif in Background51.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATTTAGAATYTTTGA
AAATTAATTAATC----
 A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T A C G T A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGAATYTTTGA
CGAATTAATTAATAATG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PH0127.1_Nobox/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGAATYTTTGA
CGCGCTAATTAGGTATC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
T A G C A T C G A T G C T C A G A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A C T G G C A T C G T A G A C T A T G C A C G T A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AATTTAGAATYTTTGA
CNAGTTAATTAATAANN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATTTAGAATYTTTGA
TAATTAATTAATAACTA----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGAATYTTTGA
CGCGTTAATTAATTACC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATTTAGAATYTTTGA--
NTAATTDGCYAATTANNWWD
 A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

PH0069.1_Hoxc4/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGAATYTTTGA
CGAATTAATTAACAATA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A A C G T A C G T A C G T A C G T A C G T

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGAATYTTTGA
CGAGTTAATTAATAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
G T A C T A C G G T C A C T A G G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A C T C T G A T G C A G C A T A G C T A C G T A C G T A C G T A C G T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AATTTAGAATYTTTGA
AATTAATTAATTAATTC---
 A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G A T C A G T G C T A C T A G G C T A G T C A G C A T A G T C A C G T C G A T A C G T A C T G C G T A
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C A C G T A C G T A C G T