Information for 25-TAGAAAGAAATTC (Motif 42)

A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T G A C T A G T C C G A T A C G T A C G T A G T C A C G T C G T A
p-value:1e-4
log p-value:-1.114e+01
Information Content per bp:1.938
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.2 +/- 15.8bp
Average Position of motif in Background76.0 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAGAAAGAAATTC--
TTGAATGAAATTCGA
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGAAAGAAATTC
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TAGAAAGAAATTC--
-----GGAAATTCCC
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TAGAAAGAAATTC--
-----GGAAATTCCC
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TAGAAAGAAATTC
---NCTGGAATGC
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C
A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAGAAAGAAATTC---
-AGAAATGACTTCCCT
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TAGAAAGAAATTC
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAGAAAGAAATTC-----
--NNNNTGAATTCANNNC
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TAGAAAGAAATTC---
------CACATTCCAT
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PH0007.1_Barx1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TAGAAAGAAATTC------
---AAAGTAATTAGTGAAT
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G C T G A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T