Information for 14-ATACTTAGGG (Motif 40)

C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T C G T A C G T A A C T G A C G T C G T A A C G T
p-value:1e-5
log p-value:-1.235e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets11.3 +/- 3.7bp
Average Position of motif in Background52.3 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0039.1_Mnx1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATACTTAGGG---
GTACTAATTAGTGGCG
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATACTTAGGG
-TAATTAGN-
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T

VSX2/MA0726.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATACTTAGGG
NTAATTAG--
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATACTTAGGG
NTAATTAG--
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATACTTAGGG
TTAATTAG--
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATACTTAGGG
AATTAATTAGT-
 A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATACTTAGGG
NNTAATTAGN-
 A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATACTTAGGG---
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATACTTAGGG
NNTAATTANN-
 A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATACTTAGGG
GCTAATTAGC-
 A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G
T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C A C G T