Information for 12-CATGTTWGAG (Motif 36)

A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G
Reverse Opposite:
G T A C G A C T T G A C G C T A G T C A G T C A A G T C C G T A A C G T T A C G
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.774
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif337.8
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets39.8 +/- 20.7bp
Average Position of motif in Background52.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CATGTTWGAG-
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGTTWGAG
ACCATATGTT--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATGTTWGAG
-AGGTGTGA-
 A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGTTWGAG
GTCATGTGACC-
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTWGAG----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T A C G T C G A T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T