Information for 18-CAGTTGTCAAACA (Motif 34)

A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
Reverse Opposite:
A G C T C T A G A C G T G A C T A C G T A T C G C G T A A G T C C G T A C T G A G T A C A C G T T C A G
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.794
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.6 +/- 29.2bp
Average Position of motif in Background49.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGTCAAACA
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CAGTTGTCAAACA
---NTGTCAN---
 A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGTCAAACA
AATTACCTGTCAATAC
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGTCAAACA
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTGTCAAACA-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAGTTGTCAAACA-
-AGGTGNCAGACAG
 A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGTCAAACA
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGTCAAACA
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGTTGTCAAACA
-ARNTGACA----
 A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGTTGTCAAACA
-AGGTGHCAGACA
 A G T C C G T A A C T G G A C T A C G T A C T G A C G T A T G C G T C A C T G A C G T A A G T C C T G A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A