Information for 8-TTTRMAATYCAGS (Motif 18)

A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C C G A T A C T G C T G A C G T A A C G T A C G T A C T G A G T C C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.4 +/- 26.1bp
Average Position of motif in Background58.9 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTRMAATYCAGS
TTTGAAACCG---
 A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTRMAATYCAGS
NNNTTTNTAATACNG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTRMAATYCAGS
ANATTTTTGCAANTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTRMAATYCAGS
ATTTGAATT-----
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTRMAATYCAGS
---RCATTCCWGG
 A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTRMAATYCAGS
NATTGTGCAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTRMAATYCAGS
CCTTTGATGT-----
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTTRMAATYCAGS--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTTRMAATYCAGS
TTATGCAAT-----
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTTRMAATYCAGS--
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A G T C A A C G T A G C T A G T C C G T A A C T G A T G C A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C