Information for 12-GKARAAGTCTATT (Motif 9)

A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A C T G C G T A A G T C A C G T A G C T A G C T A C G T G T C A G T A C
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 24.4bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GKARAAGTCTATT
--AAAAGTCAA--
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GKARAAGTCTATT--
GGCAAAAGTCCAATAA
 A C G T A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GKARAAGTCTATT
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GKARAAGTCTATT-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GKARAAGTCTATT----
---AAAAACCATTAAGG
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GKARAAGTCTATT-----
--------CTATTTTTGG
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GKARAAGTCTATT--
----AAGGATATNTN
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GKARAAGTCTATT--
-AAAAAATCGATAAT
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GKARAAGTCTATT--
-AAAAAATCAATAAT
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GKARAAGTCTATT--
-AAAAAATCGATAAT
 A C T G A C G T C G T A C T G A C T G A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T