Information for 6-GCTATTTTTA (Motif 7)

C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A
Reverse Opposite:
A C G T G C T A T G C A G C T A C T G A T C G A G A C T C T G A T C A G G T A C
p-value:1e-14
log p-value:-3.314e+01
Information Content per bp:1.678
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.99%
Number of Background Sequences with motif522.3
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets53.9 +/- 28.8bp
Average Position of motif in Background49.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
KCTATTTTTRGH
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GCTATTTTTA----
TTCTATTTTTAGNNN
 A C G T C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GCTATTTTTA--
GCTATTTTTAGC
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
TCTATTTTTAGA
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
GCTATTTATAGC
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GCTATTTTTA-
-CTATTTTTGG
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
TCTATTTATAGN
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCTATTTTTA--
GCTATTTTTGGM
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA-------
ANTAATTTTATGGCCGN
 C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTTTTA-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T C A T G A G T C G A C T C T G A A G C T G A C T C G A T A C G T C G A T T G C A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C