Information for 5-GAAGTTCAGGTGCATS (Motif 6)

A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
Reverse Opposite:
T A C G C T G A A C G T A C T G A T G C G T C A A G T C A G T C A C G T A C T G C T G A T C G A A T G C A C G T A G C T T A G C
p-value:1e-16
log p-value:-3.692e+01
Information Content per bp:1.744
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 24.6bp
Average Position of motif in Background41.5 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS
----NNCAGGTGNN--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS
----NNCAGGTGCG--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS-
-AANTTCAAGTGGCTTN
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C A C G T
A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS
----GACAGGTGTN--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS
---SDGCAGGTGCNS-
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAAGTTCAGGTGCATS
----NNCAGGTGTN--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAGTTCAGGTGCATS
----AACAGGTGT---
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAGTTCAGGTGCATS
--AGGTCAAGGTCA--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGTTCAGGTGCATS--
-ATCCACAGGTGCGAAAA
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAGTTCAGGTGCATS
--AGGTCAAGGTCA--
 A C T G C T G A C G T A A T C G A G C T A G C T G T A C T C G A A C T G C T A G C A G T A T C G A G T C T G C A A G C T A T G C
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T