Information for 3-GSRVMMVCAGCTGSDS (Motif 4)

A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
Reverse Opposite:
T A C G G C T A T A C G A G T C C G T A A T C G G T A C C G A T A C T G A G T C C A G T A C T G A C T G A G C T A T C G T G A C
p-value:1e-35
log p-value:-8.231e+01
Information Content per bp:1.610
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif11.19%
Number of Background Sequences with motif1042.0
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets46.9 +/- 24.7bp
Average Position of motif in Background48.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.89
Offset:4
Orientation:reverse strand
Alignment:GSRVMMVCAGCTGSDS
----CAGCAGCTGN--
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.88
Offset:3
Orientation:forward strand
Alignment:GSRVMMVCAGCTGSDS
---NNVVCAGCTGBN-
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GSRVMMVCAGCTGSDS
--NGNGACAGCTGCN-
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:GSRVMMVCAGCTGSDS
----NAACAGCTGT--
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.87
Offset:6
Orientation:reverse strand
Alignment:GSRVMMVCAGCTGSDS
------GCAGCTGTNN
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.87
Offset:5
Orientation:forward strand
Alignment:GSRVMMVCAGCTGSDS
-----GACAGCTGCAG
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.87
Offset:5
Orientation:forward strand
Alignment:GSRVMMVCAGCTGSDS
-----AACAGCTGCAG
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.86
Offset:6
Orientation:forward strand
Alignment:GSRVMMVCAGCTGSDS
------VCAGCTGBNN
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:GSRVMMVCAGCTGSDS
---NNAGCAGCTGCT-
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.85
Offset:4
Orientation:forward strand
Alignment:GSRVMMVCAGCTGSDS
----NAHCAGCTGD--
 A C T G T A G C T C G A T G A C T G A C G T C A T C A G A G T C C G T A A C T G T A G C A C G T A C T G A T G C C G A T A T G C
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T