Information for 13-YTSTTTGRKTAGG (Motif 10)

A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A G T C A A G T C A G T C C G T A G T C A C G T A A T C G C G T A C T A G
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.9 +/- 28.9bp
Average Position of motif in Background61.8 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-YTSTTTGRKTAGG--
NNTGTTTATTTTGGCA
 A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YTSTTTGRKTAGG---
NSTGTTTRCWCAGBNNN
 A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YTSTTTGRKTAGG---
NNNNGTTGATTGGGTCG
 A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YTSTTTGRKTAGG
-TGATTGGCTANN
 A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YTSTTTGRKTAGG
-TGTTTATTT---
 A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YTSTTTGRKTAGG
-TRTTTACTTW--
 A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--YTSTTTGRKTAGG
GAATGTTTGTTT---
 A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YTSTTTGRKTAGG
-TGTTTACTTAGG
 A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----YTSTTTGRKTAGG
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YTSTTTGRKTAGG
---TTTTATKRGG
 A G T C A C G T A T G C A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G