Information for 4-KCACCACMTCCATKGA (Motif 5)

C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
Reverse Opposite:
C A G T A G T C G T C A G C T A C G A T A C T G A C T G C G T A A C T G A C T G A C G T A C T G C T A G C G A T C A T G G T A C
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.708
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.83%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.4 +/- 22.0bp
Average Position of motif in Background54.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:KCACCACMTCCATKGA
--ACCACATCCTGT--
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KCACCACMTCCATKGA
-ATCCAC---------
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-KCACCACMTCCATKGA
NWAACCACADNN-----
 A C G T C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KCACCACMTCCATKGA
--GCCACACCCA----
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KCACCACMTCCATKGA
-GGCCACACCCAN---
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:KCACCACMTCCATKGA
-GGCCACACCCA----
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KCACCACMTCCATKGA
AAACCACAGC------
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KCACCACMTCCATKGA
-----ACWTCAAAGG-
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KCACCACMTCCATKGA
AAACCACANN------
 C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KCACCACMTCCATKGA
NNGGCGACACCTCNNN---
 A C G T A C G T A C G T C A T G G A T C G C T A A G T C A G T C C G T A A G T C T G A C C G A T G T A C G T A C C G T A C A G T A C G T A C T G G C T A
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T