Information for 3-TTCATATTATATKAAG (Motif 4)

A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
Reverse Opposite:
A T G C A G C T C A G T G T A C G C T A A C G T C G T A C G A T C G T A C G T A A C G T C G T A A C G T C A T G C T G A C G T A
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.746
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.7 +/- 12.2bp
Average Position of motif in Background47.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCATATTATATKAAG-
-TAAGATTATAATACGG
 A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTCATATTATATKAAG
NNTTTTTCTTATNT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTCATATTATATKAAG
TNNTTTCGTATTNNANN---
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCATATTATATKAAG
ATGCATAATTAATGAG-
 A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCATATTATATKAAG
ATGCATAATTAATGAG-
 A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCATATTATATKAAG
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCATATTATATKAAG
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTCATATTATATKAAG
ATGAATAATTAATG---
 A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCATATTATATKAAG-
-NANTATTATAATTNNN
 A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------TTCATATTATATKAAG
GACCACATTCATACAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C G T C A A C G T C G T A A C G T G A C T C G T A A C G T T C G A C A G T C A T G G T C A C T G A T A C G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T