Information for 15-TTGACCTGTA (Motif 27)

A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A
p-value:1e-2
log p-value:-5.035e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 24.9bp
Average Position of motif in Background59.4 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTA-
-TGACCTTGAT
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTGTA---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTA
-TGACCT---
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TTGACCTGTA---
-TGACCTTTNCNT
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTA
-TGACCTYA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTGTA
CNNTTGACCTTTG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTGTA---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTGACCTGTA
-TGACCYCT-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGACCTGTA
NTGACCTTGA
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGACCTGTA
GTGACCTT--
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T