Information for 11-GGAATAGAGTCAAAGG (Motif 20)

A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G
Reverse Opposite:
G T A C A G T C A G C T C A G T A C G T A T C G C G T A A G T C C G A T A T G C A C G T C G T A A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.929
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 20.4bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB/MA0855.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG---
-----GAGGTCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAATAGAGTCAAAGG
TGGAACAGMA-------
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG
----AAAAGTCAA---
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG---
-----GAGGTCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG-----
----AAAGGTCAAAGGTCAAC
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGAATAGAGTCAAAGG--
---AGAAAGTGAAAGTGA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGAATAGAGTCAAAGG---
-----TGGGGCAAAGGTCA
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G C G T A A C T G A C G T A T G C C G T A G C T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A