Information for 10-CTCAMTSACCTCCCTC (Motif 13)

A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A T C G C G T A A C T G A C T G A C G T A T G C C G T A A C G T A C G T A C T G C T G A A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.846
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 25.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CTCAMTSACCTCCCTC
NNNTGAACTCNNTGACCTCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTCAMTSACCTCCCTC
TGACCCAGTGACCTAC---
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCAMTSACCTCCCTC
AGGTCANTGACCTN----
 A C G T A C G T A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCAMTSACCTCCCTC--
--TATCGACCCCCCACAG
 A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTCAMTSACCTCCCTC----
------GACCCCCCGCGAAG
 A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

Vdr/MA0693.1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCAMTSACCTCCCTC
TGAACTCNATGAACTC----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCAMTSACCTCCCTC----
TCCTCCTCCCCCTCCTCCTCC
 A C G T A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTCAMTSACCTCCCTC-
-NNCNTGACCCCGCTCT
 A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTCAMTSACCTCCCTC-
-----KGCCCTTCCCCA
 A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTCAMTSACCTCCCTC
-----TGACCYCT---
 A G T C A G C T A G T C C G T A G T C A A C G T A T C G G T C A G T A C A G T C G A C T A T G C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T