Information for 12-GGCCKGCAKSKCC (Motif 13)

A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
Reverse Opposite:
A C T G A C T G G T C A A T G C G T A C A C G T A C T G A G T C G T C A A C T G A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.880
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 20.5bp
Average Position of motif in Background41.5 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCCKGCAKSKCC--
TGCCTGCGYCMCCTT
 A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCKGCAKSKCC
CTAGGCCT--------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCKGCAKSKCC
AGGCCTNG------
 A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------GGCCKGCAKSKCC
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCCKGCAKSKCC
TACCCGCATN---
 A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCCKGCAKSKCC
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGCCKGCAKSKCC
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCKGCAKSKCC
GTACCCGCATN---
 A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCCKGCAKSKCC
--CCTGCTGAGH-
 A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGCCKGCAKSKCC-
GCCGCGCAGTGCGT
 A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G C A G T A G T C A G T C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T